header logo image header logo text
Downloads Login
Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-060312-12
Gene Name: caspase 6b.2, apoptosis-related cysteine peptidase
Gene Symbol: casp6b.2
Sequence Ontology ID : SO:0001217

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: casp6c (1), casp6l2, caspase-6c (1), zgc:136946

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have cysteine-type endopeptidase activity involved in apoptotic process. Predicted to be involved in apoptotic process. Predicted to localize to the cytoplasm. Human ortholog(s) of this  ...
GENE EXPRESSION
All Expression Data: Fig. 4 from Spead et al., 2018
Wild-type Stages, Structures: Cleavage:2-cell (0.75h-1.0h) to Larval:Day 4 (96.0h-120.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa20056 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH casp6b.2 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH casp6b.2 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process apoptotic process (more)
    Cellular Component cytoplasm (more)
    Molecular Function cysteine-type endopeptidase activity (more)
    GO Terms (all 7)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA casp6l2-002 (1) 527
    mRNA casp6l2-201 (1) 1342
    casp6l2-202 (1) 770
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM casp6b.2 No data available
    MARKER RELATIONSHIPS
    casp6b.2 Contained in: [BAC] DKEY-18H4 (1) (order this)
    casp6b.2 Encodes: [cDNA] MGC:136946 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001039980 (1) 1341 bp
    Genomic GenBank:CT583642 (1) 117579 bp
    Select Tool
    Polypeptide UniProtKB:A0A2U9DQM9 (1) 257 aa
    Sequence Clusters UniGene:89539 (1)
    Sequence Information (all 16)
    ORTHOLOGY for casp6b.2 ( Chr: 3 )
    CITATIONS (16)