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ZIRC
ZFIN ID: ZDB-GENE-060303-5
Gene Name: S-phase cyclin A-associated protein in the ER
Gene Symbol: scaper
Sequence Ontology ID : SO:0000704

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Previous Name: znf291 (1)

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(Including Attributions)
Location: Chr: 25 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have nucleic acid binding activity and zinc ion binding activity. Orthologous to human SCAPER (S-phase cyclin A associated protein in the ER).
GENE EXPRESSION
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa3292 Point Mutation Unknown Premature Stop ENU
sa12343 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa25235 Point Mutation Unknown Splice Site ENU
    sa38119 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa44341 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH scaper HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Intellectual developmental disorder and retinitis pigmentosa 618195
    DISEASE ASSOCIATED WITH scaper VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Molecular Function metal ion binding (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR003604 (1)
  • InterPro:IPR032446 (1)
  • InterPro:IPR036236 (1)
  • Pfam:PF16501 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA scaper-003 (1) 543
    mRNA scaper-203 (1) 530
    scaper-204 (1) 2844
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM scaper No data available
    MARKER RELATIONSHIPS
    scaperContained in: [BAC] CH73-67K9 (1) (order this), CH211-167M1 (1) (order this)
    scaperEncodes: [cDNA] MGC:175163 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001123047 (1) 4931bp
    Genomic GenBank:BX005048 (1) 163525bp
    Select Tool
    Polypeptide UniProtKB:B1H1L9 (1) 1318aa
    Sequence Clusters UniGene:84101 (1)
    Sequence Information (all 29)
    ORTHOLOGY for scaper (Chr: 25)
    CITATIONS (18)