ZFIN ID: ZDB-GENE-060301-1
Gene Name: coiled-coil domain containing 78
Gene Symbol: ccdc78    Nomenclature History

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 24 Mapping Details/Browsers
Description: Involved in skeletal muscle fiber development. Human ortholog(s) of this gene implicated in centronuclear myopathy 4. Orthologous to human CCDC78 (coiled-coil domain containing 78).
Genome Resources: Alliance (1),  Gene:100150366 (1),  Ensembl(GRCz11):ENSDARG00000030095 (1)
GENE EXPRESSION
All Expression Data: 3 figures from 2 publications
Wild-type Stages, Structures: Segmentation:26+ somites (22.0h-24.0h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
 
High Throughput Expression: Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa3254 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-ccdc78 N/A 1
    MO2-ccdc78 N/A 1
    DISEASE ASSOCIATED WITH ccdc78 HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    centronuclear myopathy 4 Alliance ?Centronuclear myopathy 4 614807
    DISEASE ASSOCIATED WITH ccdc78 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process skeletal muscle fiber development (more)
    GO Terms (all 1)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA ccdc78-201 (1)    Ensembl 4375
    ccdc78-202 (1)    Ensembl 695
    Browsers: NCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM ccdc78 No data available
    MARKER RELATIONSHIPS
    ccdc78 Contained in: [BAC] CH211-248L17 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:XM_001919778 (1) 4482 nt
    Genomic GenBank:BX294098 (1) 152545 nt
    Select Tool
    Polypeptide UniProtKB:E7F7G2 (1) 547 aa
    Sequence Information (all 20)
    ORTHOLOGY for ccdc78 ( Chr: 24 )
    CITATIONS (17)