ZFIN ID: ZDB-GENE-060228-3
Gene Name: ubiquitin specific peptidase 12a
Gene Symbol: usp12a    Nomenclature History

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Previous Names: usp12, sb:eu882, wu:fi09d12

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 24 Mapping Details/Browsers
Description: Predicted to have cysteine-type endopeptidase activity and thiol-dependent ubiquitin-specific protease activity. Predicted to be involved in protein deubiquitination. Predicted to localize to cytosol and nucleus. Orthologous to human USP12 (ubiquitin specific peptidase 12).
Genome Resources: Alliance (1),  Gene:565736 (1),  Ensembl(GRCz11):ENSDARG00000078109 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2005 [eu882]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Sequence Targeting Reagents
Targeting Reagent Created Alleles Publications
MO1-usp12a N/A 1
PHENOTYPE No data available
DISEASE ASSOCIATED WITH usp12a HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH usp12a VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process protein deubiquitination (more)
Cellular Component cytosol (more)
Molecular Function cysteine-type endopeptidase activity (more)
GO Terms (all 12)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA usp12a-201 (1)    Ensembl 1853
ncRNA usp12a-002 (1)    Ensembl 539
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM usp12a No data available
MARKER RELATIONSHIPS
usp12a Contained in: [BAC] CH211-144A4, CH211-202A8
usp12a Encodes: [EST] eu882 (1), fi09d12
[cDNA] MGC:136837 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_001083556 (1) 1840 nt
Genomic GenBank:AL929009 (1) 208279 nt Blast at MegaBLAST
Polypeptide UniProtKB:A4FUN7 (1) 371 aa
Sequence Information (all 15)
ORTHOLOGY for usp12a ( Chr: 24 )
CITATIONS (23)