ZFIN ID: ZDB-GENE-060217-4
Gene Name: leucine-rich repeat LGI family, member 3
Gene Symbol: lgi3    Nomenclature History

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Previous Name: si:ch211-198o12.2

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 8 Mapping Details/Browsers
Description: Is expressed in head; hindbrain; and spinal cord. Orthologous to human LGI3 (leucine rich repeat LGI family member 3).
Genome Resources: Alliance (1),  Gene:654830 (1),  Ensembl(GRCz11):ENSDARG00000041358 (2)
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Wild-type Stages, Structures: Segmentation:20-25 somites (19.0h-22.0h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la026637Tg Transgenic Insertion Unknown Unknown DNA
la026638Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa12143 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH lgi3 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH lgi3 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY No data available
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA lgi3-201 (1)    Ensembl 1769
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM lgi3 No data available
    MARKER RELATIONSHIPS
    lgi3 Contained in: [BAC] CH211-198O12
    lgi3 Encodes: [cDNA] MGC:194162 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001039679 (1) 1769 nt
    Genomic GenBank:BX247873 (1) 139803 nt
    Select Tool
    Polypeptide UniProtKB:Q2HPG0 (1) 551 aa
    Sequence Information (all 12)
    ORTHOLOGY for lgi3 ( Chr: 8 )
    CITATIONS (20)