ZFIN ID: ZDB-GENE-060130-180
Gene Name: tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2a
Gene Symbol: tanc2a    Nomenclature History

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Previous Names: tanc2, sb:eu814

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 3 Mapping Details/Browsers
Description: Is expressed in hindbrain; neural rod; olfactory placode; pectoral fin; and retina. Orthologous to human TANC2 (tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2).
Genome Resources: Alliance (1),  Gene:568810 (1),  Ensembl(GRCz11):ENSDARG00000079097 (2)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la011288Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la015126Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa10844 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa13429 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa19991 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa19992 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa31322 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa33154 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa40057 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    CRISPR1-tanc2a
    2
    CRISPR2-tanc2a
    2
    CRISPR3-tanc2a
    2
    CRISPR4-tanc2a
    2
    CRISPR5-tanc2a
    2
    CRISPR6-tanc2a
    2
    CRISPR7-tanc2a
    2
    CRISPR8-tanc2a
    2
    CRISPR9-tanc2a
    2
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH tanc2a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH tanc2a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY No data available
    PROTEIN FAMILIES, DOMAINS AND SITES
    Type InterPro ID Name
    Domain IPR013026 Tetratricopeptide repeat-containing domain
    Domain IPR020683 Ankyrin repeat-containing domain
    Homologous_superfamily IPR011990 Tetratricopeptide-like helical domain superfamily
    Homologous_superfamily IPR027417 P-loop containing nucleoside triphosphate hydrolase
    Homologous_superfamily IPR036770 Ankyrin repeat-containing domain superfamily
    Repeat IPR002110 Ankyrin repeat
    Repeat IPR019734 Tetratricopeptide repeat
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA tanc2a-201 (1)    Ensembl 8053
    ncRNA tanc2a-002 (1)    Ensembl 520
    tanc2a-003 (1)    Ensembl 807
    Browsers: NCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM tanc2a No data available
    MARKER RELATIONSHIPS
    tanc2a Contained in: [BAC] CH73-1L24 (1), DKEY-3N15 (order this), DKEY-35I15 (order this), DKEY-87J4 (1) (order this), DKEY-203L23 (1) (order this), DKEYP-61G11 (1)
    tanc2a Encodes: [EST] eu814 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:XM_009299378 (1)
    Genomic GenBank:BX005394 190575 nt
    Select Tool
    Polypeptide UniProtKB:A0A2R8PY91 (1) 2024 aa
    Sequence Information (all 36)
    ORTHOLOGY for tanc2a ( Chr: 3 )
    CITATIONS (21)