ZFIN ID: ZDB-GENE-051130-1
Gene Name: ATP synthase membrane subunit eb
Gene Symbol: atp5meb    Nomenclature History

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Attributions

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Previous Names: atp5i, atp5ib, zgc:153661

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 5 Mapping Details/Browsers
Description: Predicted to have proton transmembrane transporter activity. Involved in response to hypoxia. Predicted to localize to mitochondrial proton-transporting ATP synthase complex. Is expressed in gill. Orthologous to human ATP5ME (ATP synthase membrane subunit e).
Genome Resources: Alliance (1),  Gene:767750 (1),  Ensembl(GRCz11):ENSDARG00000068940 (1)
GENE EXPRESSION
All Expression Data: 2 figures from van der Meer et al., 2005
Wild-type Stages, Structures: Adult (90d-730d, breeding adult) to Adult (90d-730d, breeding adult)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la015799Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH atp5meb HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH atp5meb VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process response to hypoxia (more)
    Cellular Component membrane (more)
    Molecular Function proton transmembrane transporter activity (more)
    GO Terms (all 11)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA atp5meb-201 (1)    Ensembl 629
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM atp5meb No data available
    MARKER RELATIONSHIPS
    atp5meb Contained in: [BAC] CH211-12E13 (1)
    atp5meb Encodes: [cDNA] MGC:153661 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001098481 (1) 716 nt
    Genomic GenBank:AL845369 (1) 190981 nt
    Select Tool
    Polypeptide UniProtKB:A0A2R8RU75 (1) 102 aa
    Sequence Information (all 12)
    ORTHOLOGY for atp5meb ( Chr: 5 )
    CITATIONS (27)