ZFIN ID: ZDB-GENE-051120-174
Gene Name: cytoskeleton associated protein 5
Gene Symbol: ckap5    Nomenclature History

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Previous Names: im:7143385, wu:fb14c01, wu:fb59e03, wu:fi33f02, zgc:123012

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 25 Mapping Details/Browsers
Description: Predicted to have microtubule binding activity and microtubule plus end polymerase. Predicted to be involved in microtubule cytoskeleton organization. Predicted to colocalize with microtubule plus-end. Orthologous to human CKAP5 (cytoskeleton associated protein 5).
Genome Resources: Alliance (1),  Gene:492614 (1),  Ensembl(GRCz11):ENSDARG00000102674 (1)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7143385]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
High Throughput Expression: GEO (1) Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa457 Point Mutation Unknown Splice Site ENU
sa6795 Point Mutation Unknown Splice Site ENU
sa9797 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa11488 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa24594 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa24595 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH ckap5 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH ckap5 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process microtubule-based process (more)
    Cellular Component chromosome, centromeric region (more)
    Molecular Function microtubule binding (more)
    GO Terms (all 15)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    aberrant processed transcript ckap5-202 (1)    Ensembl 3185
    mRNA ckap5-203 (1)    Ensembl 6248
    ckap5-205 (1)    Ensembl 6161
    ncRNA ckap5-004 (1)    Ensembl 771
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM ckap5 No data available
    MARKER RELATIONSHIPS
    ckap5 Contained in: [BAC] CH73-383B21 (1)
    ckap5 Encodes: [EST] fb14c01, fb59e03, fi33f02, IMAGE:7143385 (1)
    [cDNA] MGC:123012 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001037667 (1) 6170 nt
    Genomic GenBank:FP236801 (1) 103452 nt
    Select Tool
    Polypeptide UniProtKB:A0A0R4IA93 (1) 2033 aa
    Sequence Information (all 45)
    ORTHOLOGY for ckap5 ( Chr: 25 )
    CITATIONS (23)