ZFIN ID: ZDB-GENE-051120-174
Gene Name: cytoskeleton associated protein 5
Gene Symbol: ckap5
Sequence Ontology ID : SO:0000704

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Previous Names: im:7143385, wu:fb14c01, wu:fb59e03, wu:fi33f02, zgc:123012

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(Including Attributions)
Location: Chr: 25 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have microtubule plus-end binding activity; predicted to be involved in establishment or maintenance of microtubule cytoskeleton polarity, microtubule cytoskeleton organization, and  ...
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7143385]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa457 Point Mutation Unknown Splice Site ENU
sa6795 Point Mutation Unknown Splice Site ENU
sa9797 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa11488 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa24594 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa24595 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH ckap5 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH ckap5 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process microtubule-based process (more)
    Cellular Component centrosome (more)
    Molecular Function microtubule binding (more)
    GO Terms (all 11)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR011989 (1)
  • InterPro:IPR016024 (1)
  • InterPro:IPR021133 (1)
  • InterPro:IPR024395 (1)
  • InterPro:IPR029632 (1)
  • InterPro:IPR034085 (1)
  • PROSITE:PS50077 (1)
  • Pfam:PF12348 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA ckap5-004 (1) 771
    aberrant processed transcript ckap5-202 (1) 3185
    mRNA ckap5-203 (1) 6248
    ckap5-205 (1) 6161
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM ckap5 No data available
    MARKER RELATIONSHIPS
    ckap5Contained in: [BAC] CH73-383B21 (1) (order this)
    ckap5Encodes: [EST] fb14c01, fb59e03, fi33f02, IMAGE:7143385 (1) (order this)
    [cDNA] MGC:123012 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001037667 (1) 6170bp
    Genomic GenBank:FP236801 (1) 103452bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4IA93 (1) 2033aa
    Sequence Clusters UniGene:75286 (1)
    Sequence Information (all 46)
    OTHER ckap5 GENE PAGES
  • Alliance (1)
  • Gene:492614 (1)
  • VEGA:OTTDARG00000039325 (1)
  • Ensembl(GRCz11):ENSDARG00000102674 (1)
  • ORTHOLOGY for ckap5 (Chr: 25)
    CITATIONS (19)