ZFIN ID: ZDB-GENE-051030-63
Gene Name: thioredoxin-like 4B
Gene Symbol: txnl4b    Nomenclature History

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Previous Name: zgc:123253 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 1 Mapping Details/Browsers
Description: Predicted to be involved in mRNA splicing, via spliceosome. Predicted to localize to U4/U6 x U5 tri-snRNP complex and U5 snRNP. Orthologous to human TXNL4B (thioredoxin like 4B).
Genome Resources: Alliance (1),  Gene:641329 (1),  Ensembl(GRCz11):ENSDARG00000058962 (2)
GENE EXPRESSION
High Throughput Expression: GEO (1) Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa2009 Point Mutation Unknown Premature Stop ENU
sa5654 Point Mutation Unknown Premature Stop ENU
zko23a Indel Unknown Unknown CRISPR
  • China Zebrafish Resource Center (CZRC) (order this)
  • zko23b Insertion Unknown Unknown CRISPR
  • China Zebrafish Resource Center (CZRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    CRISPR1-txnl4b 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH txnl4b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH txnl4b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process mRNA processing (more)
    Cellular Component nucleus (more)
    Molecular Function molecular_function (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA txnl4b-201 (1)    Ensembl 835
    txnl4b-202 (1)    Ensembl 960
    ncRNA txnl4b-003 (1) 844
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM txnl4b No data available
    MARKER RELATIONSHIPS
    txnl4b Contained in: [BAC] CH73-41E3 (1)
    txnl4b Encodes: [cDNA] MGC:123253 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001037123 (1) 820 nt
    Genomic GenBank:CU571081 (1) 130071 nt
    Select Tool
    Polypeptide UniProtKB:Q3B728 (1) 149 aa
    Sequence Information (all 16)
    ORTHOLOGY for txnl4b ( Chr: 1 )
    CITATIONS (19)