ZFIN ID: ZDB-GENE-051030-123
Gene Name: carbonic anhydrase Xa
Gene Symbol: ca10a    Nomenclature History

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Previous Names: si:ch211-29a20.1, zgc:123167 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 12 Mapping Details/Browsers
Description: Predicted to have hydro-lyase activity. Involved in swimming behavior. Is expressed in several structures, including cardiovascular system; eye; gill; integument; and pleuroperitoneal region. Orthologous to human CA10 (carbonic anhydrase 10).
Genome Resources: Alliance (1),  Gene:641327 (1),  Ensembl(GRCz11):ENSDARG00000052644 (2)
GENE EXPRESSION
All Expression Data: 3 figures from 2 publications
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa15147 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    CRISPR1-ca10a
    1
    CRISPR2-ca10a
    1
    CRISPR3-ca10a
    1
    MO1-ca10a N/A 1
    MO2-ca10a N/A 1
    DISEASE ASSOCIATED WITH ca10a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH ca10a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process swimming behavior (more)
    Cellular Component cellular_component (more)
    Molecular Function carbonate dehydratase activity (more)
    GO Terms (all 6)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA ca10a-202 (1)    Ensembl 251
    ca10a-203 (1)    Ensembl 841
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM ca10a No data available
    MARKER RELATIONSHIPS
    ca10a Contained in: [BAC] CH211-29A20 (1), DKEY-41D18 (1) (order this), DKEY-204L23 (1) (order this)
    ca10a Encodes: [cDNA] MGC:123167 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001037121 (1) 1250 nt
    Genomic RefSeq:NW_018394838 (1) Blast at MegaBLAST
    Polypeptide UniProtKB:F1QMF0 (1) 328 aa
    Sequence Information (all 19)
    ORTHOLOGY for ca10a ( Chr: 12 )
    CITATIONS (22)