ZFIN ID: ZDB-GENE-051023-8
Gene Name: apolipoprotein Db
Gene Symbol: apodb    Nomenclature History

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Previous Name: zgc:123339

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 24 Mapping Details/Browsers
Description: Predicted to have lipid binding activity. Predicted to be involved in lipid metabolic process and response to reactive oxygen species. Predicted to localize to the cytoplasm. Human ortholog(s) of this gene implicated in obesity and type 2 diabetes mellitus. Orthologous to human APOD (apolipoprotein D).
Genome Resources: Alliance (1),  Gene:567972 (1),  Ensembl(GRCz11):ENSDARG00000057437 (2)
GENE EXPRESSION
Curated Microarray Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa24514 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH apodb HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH apodb VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process aging (more)
    Cellular Component cytoplasm (more)
    Molecular Function lipid binding (more)
    GO Terms (all 6)
    PROTEIN FAMILIES, DOMAINS AND SITES
    Type InterPro ID Name
    Conserved_site IPR022272 Lipocalin family conserved site
    Domain IPR000566 Lipocalin/cytosolic fatty-acid binding domain
    Family IPR002969 Apolipoprotein D
    Family IPR022271 Lipocalin, ApoD type
    Family IPR026222 Apolipoprotein D, vertebrates
    Homologous_superfamily IPR012674 Calycin
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA apodb-202 (1)    Ensembl 1058
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM apodb No data available
    MARKER RELATIONSHIPS
    apodb Contained in: [BAC] DKEYP-72F10 (1)
    apodb Encodes: [cDNA] MGC:123339 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001037695 (1) 1000 nt
    Genomic GenBank:CR450695 (1) 187631 nt
    Select Tool
    Polypeptide UniProtKB:F1QDM9 (1) 186 aa
    Sequence Information (all 11)
    ORTHOLOGY for apodb ( Chr: 24 )
    CITATIONS (16)