ZFIN Gene: dpf1

ZFIN ID: ZDB-GENE-050913-31

ZFIN ID: ZDB-GENE-050913-31

Gene Name:

D4, zinc and double PHD fingers family 1

Gene Symbol:

dpf1

Sequence Ontology ID :

SO:0000704

Previous Name:

zgc:110104 (1)

Location:

Chr: 15 Mapping Details/Browsers

Nomenclature History

AUTOMATED DESCRIPTION

Predicted to have histone acetyltransferase activity and histone binding activity. Predicted to be involved in negative regulation of transcription, DNA-templated; nervous system development; and ...

GENE EXPRESSION
Directly Submitted Expression Data:	6 figures (8 images) from Thisse et al., 2004 [MGC:110104]
Wild-type Stages, Structures:	Segmentation:20-25 somites (19.0h-22.0h) to Hatching:Long-pec (48.0h-60.0h)
	brain olfactory placode telencephalon

MUTATIONS AND SEQUENCE TARGETING REAGENTS

Allele	Type	Localization	Consequence	Mutagen	Suppliers
sa1904	Point Mutation	Unknown	Premature Stop	ENU

PHENOTYPE No data available

DISEASE ASSOCIATED WITH dpf1 HUMAN ORTHOLOG No data available

DISEASE ASSOCIATED WITH dpf1 VIA EXPERIMENTAL MODELS No data available

GENE ONTOLOGY

Ontology	GO Term
Biological Process	negative regulation of transcription, DNA-templated (more)
Cellular Component	nBAF complex (more)
Molecular Function	metal ion binding (more)

GO Terms (all 12)

PROTEIN FAMILIES, DOMAINS AND SITES
InterPro:IPR001965 (1) InterPro:IPR011011 (1) InterPro:IPR013083 (1) InterPro:IPR013087 (1) InterPro:IPR019787 (1) InterPro:IPR025750 (1) InterPro:IPR036236 (1) InterPro:IPR038046 (1)	PROSITE:PS00028 (1) PROSITE:PS50016 (1) PROSITE:PS50157 (1)	Pfam:PF00628 (1) Pfam:PF14051 (1)

TRANSCRIPTS
Type	Name	Length (bp)	Analysis
mRNA	dpf1-201 (1)	1200	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	dpf1-202 (1)	769	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	dpf1-203 (1)	1385	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

GENE PRODUCT DESCRIPTION No description available

INTERACTIONS AND PATHWAYS

ANTIBODIESNo data available

PLASMIDSNo data available

CONSTRUCTS WITH SEQUENCES FROM dpf1 No data available

MARKER RELATIONSHIPS

dpf1Contained in:	[BAC] CH211-11N16 (1) (order this), CH211-151C7 (1) (order this)
dpf1Encodes:	[cDNA] MGC:110104 (1) (order this)

SEQUENCE INFORMATION

Type	Accession #	Length (bp/aa)	Analysis
RNA	RefSeq:NM_001030204 (1)	1444bp	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Genomic	GenBank:BX957341 (1)	177343bp	Select Tool MegaBLAST Ensembl
Polypeptide	UniProtKB:A0A0R4IP72 (1)	394aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
Sequence Clusters	UniGene:84982 (1)

Sequence Information (all 19)

OTHER dpf1 GENE PAGES

Alliance (1)

Gene:566219 (1)

VEGA:OTTDARG00000022865 (1)

Ensembl(GRCz11):ENSDARG00000099927 (1)

ORTHOLOGY for dpf1 (Chr: 15)

CITATIONS (17)

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