ZFIN ID: ZDB-GENE-050913-31
Gene Name: D4, zinc and double PHD fingers family 1
Gene Symbol: dpf1
Sequence Ontology ID : SO:0000704

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Previous Name: zgc:110104 (1)

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(Including Attributions)
Location: Chr: 15 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
Directly Submitted Expression Data: 6 figures (8 images) from Thisse et al., 2004 [MGC:110104]
Wild-type Stages, Structures: Segmentation:20-25 somites (19.0h-22.0h) to Hatching:Long-pec (48.0h-60.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa1904 Point Mutation Unknown Premature Stop ENU
PHENOTYPE No data available
DISEASE ASSOCIATED WITH dpf1 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH dpf1 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Cellular Component nBAF complex (more)
Molecular Function metal ion binding (more)
GO Terms (all 4)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001965 (1)
  • InterPro:IPR011011 (1)
  • InterPro:IPR013083 (1)
  • InterPro:IPR013087 (1)
  • InterPro:IPR019787 (1)
  • InterPro:IPR025750 (1)
  • InterPro:IPR036236 (1)
  • InterPro:IPR038046 (1)
  • PROSITE:PS00028 (1)
  • PROSITE:PS50016 (1)
  • PROSITE:PS50157 (1)
  • Pfam:PF00628 (1)
  • Pfam:PF14051 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA dpf1-001 (1) 1385
    dpf1-002 (1) 1200
    dpf1-003 (1) 769
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM dpf1 No data available
    MARKER RELATIONSHIPS
    dpf1Contained in: [BAC] CH211-11N16 (1) (order this), CH211-151C7 (1) (order this)
    dpf1Encodes: [cDNA] MGC:110104 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001030204 (1) 1444bp
    Genomic GenBank:BX957341 (1) 177343bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4IP72 (1) 394aa
    Sequence Clusters UniGene:84982 (1)
    Sequence Information (all 19)
    OTHER dpf1 GENE PAGES
  • Alliance (1)
  • Gene:566219 (1)
  • VEGA:OTTDARG00000022865 (1)
  • ORTHOLOGY for dpf1 (Chr: 15)
    CITATIONS (15)