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ZIRC
ZFIN ID: ZDB-GENE-050913-25
Gene Name: calcium binding protein 2a
Gene Symbol: cabp2a    Nomenclature History

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Previous Name: zgc:112300 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 1 Mapping Details/Browsers
Description: Predicted to have calcium ion binding activity. Human ortholog(s) of this gene implicated in autosomal recessive nonsyndromic deafness 93. Is expressed in notochord and retinal inner nuclear layer. Orthologous to human CABP2 (calcium binding protein 2).
Genome Resources: Alliance (1),  Gene:572226 (1),  Ensembl(GRCz11):ENSDARG00000052016 (2)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa32735 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • zko829a Small Deletion Unknown Unknown CRISPR
  • China Zebrafish Resource Center (CZRC) (order this)
  • zko829b Small Deletion Unknown Unknown CRISPR
  • China Zebrafish Resource Center (CZRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    CRISPR1-cabp2a 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH cabp2a HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    autosomal recessive nonsyndromic deafness 93 Alliance Deafness, autosomal recessive 93 614899
    DISEASE ASSOCIATED WITH cabp2a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component cellular_component (more)
    Molecular Function calcium ion binding (more)
    GO Terms (all 2)
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA cabp2a-201 (1)    Ensembl 1730
    ncRNA cabp2a-002 (1)    Ensembl 488
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM cabp2a No data available
    MARKER RELATIONSHIPS
    cabp2a Contained in: [BAC] DKEY-59P5 (order this)
    cabp2a Encodes: [cDNA] MGC:112300 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001030268 (1) 1600 bp
    Genomic GenBank:CR848663 (1) 193836 bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4IU57 (1) 236 aa
    Sequence Clusters UniGene:133604 (1)
    Sequence Information (all 13)
    ORTHOLOGY for cabp2a ( Chr: 1 )
    CITATIONS (18)