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ZIRC
ZFIN ID: ZDB-GENE-050913-10
Gene Name: biogenesis of lysosomal organelles complex-1, subunit 3
Gene Symbol: bloc1s3
Sequence Ontology ID : SO:0000704

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Attributions

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Previous Names: hps8 (1), zgc:114034

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(Including Attributions)
Location: Chr: 15 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to localize to the BLOC-1 complex; orthologous to human BLOC1S3 (biogenesis of lysosomal organelles complex 1 subunit 3).
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:114034]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTSNo data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH bloc1s3 HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
Hermansky-Pudlak syndrome 8 Hermansky-Pudlak syndrome 8 614077
DISEASE ASSOCIATED WITH bloc1s3 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process endosomal transport (more)
Cellular Component BLOC-1 complex (more)
GO Terms (all 2)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR017245 (1)
  • Pfam:PF15753 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA bloc1s3-201 (1) 952
    bloc1s3-202 (1) 1430
    aberrant processed transcript cr387932.1-201 (1) 933
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM bloc1s3 No data available
    MARKER RELATIONSHIPS
    bloc1s3Contained in: [BAC] CH211-272B8 (1) (order this)
    bloc1s3Encodes: [cDNA] MGC:114034 (1) (order this), MGC:191467 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001025476 (1) 1439bp
    Genomic GenBank:CR387932 (1) 152689bp
    Select Tool
    Polypeptide UniProtKB:Q5XJ65 (1) 234aa
    Sequence Clusters UniGene:80829 (1)
    Sequence Information (all 17)
    ORTHOLOGY for bloc1s3 (Chr: 15)
    CITATIONS (17)