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ZIRC
ZFIN ID: ZDB-GENE-050912-1
Gene Name: vacuolar protein sorting 13 homolog D
Gene Symbol: vps13d
Sequence Ontology ID : SO:0000704

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(Including Attributions)
Location: Chr: 23 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to be involved in protein retention in Golgi apparatus and protein targeting to vacuole; predicted to localize to the extrinsic component of membrane; orthologous to human VPS13D (vacuolar  ...
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la011061Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la014355Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la022547Tg Transgenic Insertion Unknown Unknown DNA
    sa551 Point Mutation Unknown Splice Site ENU
    sa9084 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa16971 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa24314 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa24315 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa31088 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa37691 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa37692 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa43971 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa45002 Point Mutation Unknown Unknown ENU
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH vps13d HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Spinocerebellar ataxia, autosomal recessive 4 607317
    DISEASE ASSOCIATED WITH vps13d VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY No data available
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA vps13d-202 (1) 6531
    vps13d-203 (1) 6932
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM vps13d No data available
    MARKER RELATIONSHIPS
    vps13dContained in: [BAC] CH211-145D10 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_001919953 (1)
    Genomic GenBank:CR548634 (1) 153164bp
    Select Tool
    Polypeptide UniProtKB:E7F307 (1) 3956aa
    Sequence Clusters UniGene:126483 (1)
    Sequence Information (all 25)
    ORTHOLOGY for vps13d (Chr: 23)
    CITATIONS (18)