Gene

c1qtnf5

ID
ZDB-GENE-050706-101
Name
C1q and TNF related 5
Symbol
c1qtnf5 Nomenclature History
Previous Names
  • wu:fb02c10
  • wu:fb02f05
  • zgc:112378
Type
protein_coding_gene
Location
Chr: 15 Mapping Details/Browsers
Description
Predicted to localize to collagen trimer and extracellular region. Human ortholog(s) of this gene implicated in isolated microphthalmia 5; late-onset retinal degeneration; microphthalmia; nanophthalmos; and retinitis pigmentosa. Is expressed in eye. Orthologous to several human genes including MFRP (membrane frizzled-related protein).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
2 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With c1qtnf5 Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
late-onset retinal degeneration Alliance Retinal degeneration, late-onset, autosomal dominant 605670
Associated With c1qtnf5 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001073 C1q domain
Homologous_superfamily IPR008983 Tumour necrosis factor-like domain superfamily
Repeat IPR008160 Collagen triple helix repeat
Domain Details Per Protein
Protein Length C1q domain Collagen triple helix repeat Tumour necrosis factor-like domain superfamily
UniProtKB:Q4KMC6 248
Transcripts
Genome Browsers
Type Name Annotation Method Length (nt) Analysis
mRNA c1qtnf5-201 (1) Havana 1084 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations