ZFIN ID: ZDB-GENE-050626-55
Gene Name: cathepsin S, ortholog 2, tandem duplicate 2
Gene Symbol: ctss2.2
Sequence Ontology ID : SO:0000704

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Previous Names: ctssb.2 (1), ctssb2 (1), wu:fj84d06, zgc:111950, zgc:112489

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(Including Attributions)
Location: Chr: 16 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have cysteine-type endopeptidase activity; predicted to be involved in proteolysis involved in cellular protein catabolic process; predicted to localize to the extracellular space and  ...
GENE EXPRESSION
Directly Submitted Expression Data: 6 figures (11 images) from Thisse et al., 2004 [MGC:112489]
  6 figures (8 images) from Thisse et al., 2004 [MGC:111950]
Wild-type Stages, Structures: Gastrula:50%-epiboly (5.25h-5.66h) to Hatching:Long-pec (48.0h-60.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTSNo data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH ctss2.2 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH ctss2.2 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process proteolysis (more)
Cellular Component extracellular space (more)
Molecular Function cysteine-type peptidase activity (more)
GO Terms (all 11)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000169 (1)
  • InterPro:IPR000668 (1)
  • InterPro:IPR013128 (1)
  • InterPro:IPR013201 (1)
  • InterPro:IPR025660 (1)
  • InterPro:IPR025661 (1)
  • InterPro:IPR038765 (1)
  • InterPro:IPR039417 (1)
  • PROSITE:PS00139 (1)
  • PROSITE:PS00639 (1)
  • PROSITE:PS00640 (1)
  • Pfam:PF00112 (1)
  • Pfam:PF08246 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA ctss2.2-001 (1) 1267
    ncRNA ctss2.2-002 (1) 615
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM ctss2.2 No data available
    MARKER RELATIONSHIPS
    ctss2.2Contained in: [BAC] DKEY-30O16 (1) (order this)
    ctss2.2Encodes: [EST] fj84d06 (1)
    [cDNA] MGC:111950 (1) (order this), MGC:112489 (1) (order this), MGC:191537 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001017661 (1) 1238bp
    Genomic GenBank:BX248517 (1) 201353bp Blast at MegaBLAST
    Polypeptide UniProtKB:A2BF64 (1) 330aa
    Sequence Clusters UniGene:132688 (1)
    Sequence Information (all 22)
    OTHER ctss2.2 GENE PAGES
  • Alliance (1)
  • Gene:337572 (1)
  • VEGA:OTTDARG00000018947 (1)
  • Ensembl(GRCz11):ENSDARG00000013771 (2)
  • ORTHOLOGY for ctss2.2 (Chr: 16)
    CITATIONS (25)