ZFIN ID: ZDB-GENE-050626-49
Gene Name: peroxisomal biogenesis factor 16
Gene Symbol: pex16    Nomenclature History

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Previous Names: im:6894523, zgc:112248

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 18 Mapping Details/Browsers
Description: Predicted to be involved in peroxisome organization. Predicted to localize to peroxisomal membrane. Human ortholog(s) of this gene implicated in peroxisomal biogenesis disorder and peroxisome biogenesis disorder 8A. Orthologous to human PEX16 (peroxisomal biogenesis factor 16).
Genome Resources: Alliance (1),  Gene:573990 (1),  Ensembl(GRCz11):ENSDARG00000058202 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:6894523]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa44898 Point Mutation Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH pex16 HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    peroxisome biogenesis disorder 8A Alliance Peroxisome biogenesis disorder 8A (Zellweger) 614876
    Peroxisome biogenesis disorder 8B 614877
    DISEASE ASSOCIATED WITH pex16 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process peroxisome organization (more)
    Cellular Component integral component of membrane (more)
    Molecular Function molecular_function (more)
    GO Terms (all 6)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA pex16-201 (1)    Ensembl 1451
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM pex16 No data available
    MARKER RELATIONSHIPS
    pex16 Contained in: [BAC] DKEY-38C18 (1) (order this)
    pex16 Encodes: [EST] IMAGE:6894523 (1)
    [cDNA] MGC:112248 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001025169 (1) 1411 nt
    Genomic GenBank:CR792424 (1) 190868 nt
    Select Tool
    Polypeptide UniProtKB:F1RDG2 (1) 335 aa
    Sequence Information (all 11)
    ORTHOLOGY for pex16 ( Chr: 18 )
    CITATIONS (24)