ZFIN ID: ZDB-GENE-050609-24
Gene Name: protocadherin 1 gamma 31
Gene Symbol: pcdh1g31    Nomenclature History

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Previous Name: DrPcdh1g27 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 10 Mapping Details/Browsers
Description: Predicted to have calcium ion binding activity. Predicted to be involved in cell adhesion. Predicted to localize to integral component of plasma membrane. Is expressed in brain.
Genome Resources: Alliance (1),  Gene:554015 (1),  Ensembl(GRCz11):ENSDARG00000100670 (1)
GENE EXPRESSION
All Expression Data: Fig. S1 from Wu, 2005
Wild-type Stages, Structures: Adult (90d-730d, breeding adult) to Adult (90d-730d, breeding adult)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa31779 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH pcdh1g31 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH pcdh1g31 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cell adhesion (more)
    Cellular Component integral component of membrane (more)
    Molecular Function calcium ion binding (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA pcdh1g31-201 (1)    Ensembl 4370
    ncRNA pcdh1g31-002 (1) 901
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM pcdh1g31 No data available
    MARKER RELATIONSHIPS
    pcdh1g31 Contained in: [BAC] DKEY-179G5 (1) (order this)
    pcdh1g31 Encodes: [cDNA] MGC:193612 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001024127 (1) 4372 nt
    Genomic GenBank:AC144828 (1) 187958 nt
    Select Tool
    Polypeptide UniProtKB:B3DGR7 (1) 951 aa
    Sequence Information (all 16)
    ORTHOLOGY for pcdh1g31 ( Chr: 10 )
    CITATIONS (17)