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General Information
ZIRC
ZFIN ID: ZDB-GENE-050522-79
Gene Name: TBC1 domain family, member 17
Gene Symbol: tbc1d17    Nomenclature History

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Previous Names: wu:fc56c02, zgc:110443

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 3 Mapping Details/Browsers
Description: Predicted to have GTPase activator activity and Rab GTPase binding activity. Predicted to be involved in activation of GTPase activity and intracellular protein transport. Is expressed in pharyngeal arch. Orthologous to human TBC1D17 (TBC1 domain family member 17).
Genome Resources: Alliance (1),  Gene:554092 (1),  Ensembl(GRCz11):ENSDARG00000005927 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:110443]
  6 figures (9 images) from Thisse et al., 2004 [IMAGE:7166278]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa33193 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH tbc1d17 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH tbc1d17 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process activation of GTPase activity (more)
    Molecular Function GTPase activator activity (more)
    GO Terms (all 4)
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA tbc1d17-201 (1)    Ensembl 2438
    tbc1d17-203 (1)    Ensembl 1814
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM tbc1d17 No data available
    MARKER RELATIONSHIPS
    tbc1d17 Contained in: [BAC] CH211-152F23 (1) (order this)
    tbc1d17 Encodes: [EST] fc56c02, IMAGE:7166278 (1) (order this)
    [cDNA] MGC:110443 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001024394 (1) 1829 bp
    Genomic GenBank:BX005066 (1) 172909 bp
    Select Tool
    Polypeptide UniProtKB:F1QXN6 (1) 639 aa
    Sequence Clusters UniGene:79042 (1)
    Sequence Information (all 20)
    ORTHOLOGY for tbc1d17 ( Chr: 3 )
    CITATIONS (16)