ZFIN ID: ZDB-GENE-050522-7
Gene Name: zgc:113276
Gene Symbol: zgc:113276    Nomenclature History

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 11 Mapping Details/Browsers
Description: Is expressed in myotome.
Genome Resources: Alliance (1),  Gene:553748 (1),  Ensembl(GRCz11):ENSDARG00000056650 (1)

Nomenclature Note: This gene is characterized by full length cDNAs isolated as part of the Zebrafish Gene Collection (ZGC). When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix `zgc:' indicates that this gene is represented by cDNAs generated by the ZGC project.

GENE EXPRESSION
Directly Submitted Expression Data: 6 figures (6 images) from Thisse et al., 2004 [IMAGE:7158070]
Wild-type Stages, Structures: Segmentation:20-25 somites (19.0h-22.0h) to Pharyngula:Prim-25 (36.0h-42.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa12326 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa41864 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa45431 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH zgc:113276 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH zgc:113276 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component cellular_component (more)
    GO Terms (all 1)
    PROTEIN FAMILIES, DOMAINS AND SITES
    Type InterPro ID Name
    Family IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
    Homologous_superfamily IPR036188 FAD/NAD(P)-binding domain superfamily
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA zgc:113276-201 (1)    Ensembl 1699
    ncRNA zgc:113276-002 (1) 579
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM zgc:113276 No data available
    MARKER RELATIONSHIPS
    zgc:113276 Contained in: [BAC] CH211-79O8 (1)
    zgc:113276 Encodes: [EST] IMAGE:7158070 (1)
    [cDNA] MGC:113276 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001020719 (1) 1930 nt
    Genomic GenBank:CR450831 (1) 190163 nt
    Select Tool
    Polypeptide UniProtKB:A0A0R4IGI3 (1) 547 aa
    Sequence Information (all 14)
    ORTHOLOGY for zgc:113276 ( Chr: 11 )
    CITATIONS (15)