ZFIN ID: ZDB-GENE-050522-534
Gene Name: growth factor independent 1A transcription repressor a
Gene Symbol: gfi1aa
Sequence Ontology ID : SO:0000704

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: gfi1.1, gfi1a, zgc:113277 (1)

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 2 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have metal ion binding activity and nucleic acid binding activity; involved in erythrocyte differentiation and primitive hemopoiesis; orthologous to human GFI1 (growth factor independent  ...
GENE EXPRESSION
All Expression Data: 16 figures from 6 publications
Directly Submitted Expression Data: 6 figures (10 images) from Thisse et al., 2004 [IMAGE:7158523]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
qmc551Gt Transgenic Insertion Intron 1 Unknown DNA
sa9056 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa11633 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa16850 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: 6 figures from 3 publications
    Observed in:
    DISEASE ASSOCIATED WITH gfi1aa HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    ?Neutropenia, nonimmune chronic idiopathic, of adults 607847
    ?Neutropenia, nonimmune chronic idiopathic, of adults 607847
    ?Neutropenia, severe congenital 2, autosomal dominant 613107
    ?Neutropenia, severe congenital 2, autosomal dominant 613107
    DISEASE ASSOCIATED WITH gfi1aa VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process erythrocyte differentiation (more)
    Molecular Function metal ion binding (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR013087 (1)
  • InterPro:IPR029840 (1)
  • InterPro:IPR036236 (1)
  • PROSITE:PS00028 (1)
  • PROSITE:PS50157 (1)
  • Pfam:PF00096 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA gfi1aa-201 (1) 1464
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM gfi1aa
    MARKER RELATIONSHIPS
    gfi1aaContained in: [BAC] CH73-243I7 (1) (order this), DKEY-63K7 (1) (order this)
    gfi1aaEncodes: [EST] IMAGE:7158523 (1) (order this)
    [cDNA] MGC:113277 (1) (order this), MGC:192642 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001020776 (1) 1480bp
    Genomic GenBank:CR450845 (1) 232604bp Blast at MegaBLAST
    Polypeptide UniProtKB:F1RBA7 (1) 385aa
    Sequence Clusters UniGene:87180 (1)
    Sequence Information (all 15)
    OTHER gfi1aa GENE PAGES
  • Alliance (1)
  • Gene:553814 (1)
  • VEGA:OTTDARG00000021460 (1)
  • Ensembl(GRCz11):ENSDARG00000020746 (2)
  • ORTHOLOGY for gfi1aa (Chr: 2)
    CITATIONS (34)