ZFIN ID: ZDB-GENE-050522-523
Gene Name: CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1
Gene Symbol: ctdsp1    Nomenclature History

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Previous Names: fj83f12, im:7141428, wu:fj83f12, zgc:113169

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 9 Mapping Details/Browsers
Description: Predicted to have RNA polymerase II CTD heptapeptide repeat phosphatase activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Orthologous to human CTDSP1 (CTD small phosphatase 1).
Genome Resources: Alliance (1),  Gene:553744 (1),  Ensembl(GRCz11):ENSDARG00000040674 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:113169]
  1 figure (1 image) from Thisse et al., 2004 [IMAGE:7141428]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa18259 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH ctdsp1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH ctdsp1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Molecular Function phosphatase activity (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA ctdsp1-201 (1)    Ensembl 2942
    Browsers: NCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM ctdsp1 No data available
    MARKER RELATIONSHIPS
    ctdsp1 Contained in: [BAC] CH211-247B3 (1)
    ctdsp1 Encodes: [EST] fj83f12, IMAGE:7141428 (1)
    [cDNA] MGC:113169 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:XM_009304902 (1)
    Genomic GenBank:BX322540 (1) 156150 nt
    Select Tool
    Polypeptide UniProtKB:B0S5V5 (1) 265 aa
    Sequence Information (all 19)
    ORTHOLOGY for ctdsp1 ( Chr: 9 )
    CITATIONS (21)