ZFIN ID: ZDB-GENE-050522-502
Gene Name: tRNA selenocysteine 1 associated protein 1a
Gene Symbol: trnau1apa    Nomenclature History

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Previous Names: trnau1ap, zgc:110606 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 19 Mapping Details/Browsers
Description: Predicted to have mRNA binding activity. Predicted to be involved in mRNA splice site selection. Predicted to localize to cytosol. Orthologous to human TRNAU1AP (tRNA selenocysteine 1 associated protein 1).
Genome Resources: Alliance (1),  Gene:553636 (1),  Ensembl(GRCz11):ENSDARG00000101323 (1)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:110606]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH trnau1apa HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH trnau1apa VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process translation (more)
Cellular Component cytoplasm (more)
Molecular Function nucleic acid binding (more)
GO Terms (all 9)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA trnau1apa-201 (1)    Ensembl 2479
ncRNA trnau1apa-002 (1)    Ensembl 875
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM trnau1apa No data available
MARKER RELATIONSHIPS
trnau1apa Contained in: [BAC] DKEY-194C21 (1) (order this)
trnau1apa Encodes: [cDNA] MGC:110606 (1), MGC:191514 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_001020609 (1) 1139 nt
Genomic GenBank:BX530067 (1) 203882 nt Blast at MegaBLAST
Polypeptide UniProtKB:B2GPG6 (1) 314 aa
Sequence Information (all 16)
ORTHOLOGY for trnau1apa ( Chr: 19 )
CITATIONS (21)