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General Information
ZIRC
ZFIN ID: ZDB-GENE-050522-44
Gene Name: thymine DNA glycosylase, tandem duplicate 1
Gene Symbol: tdg.1
Sequence Ontology ID : SO:0000704

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Attributions

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Previous Names: tdg, wu:fb44b11, zgc:110622

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(Including Attributions)
Location: Chr: 25 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have pyrimidine-specific mismatch base pair DNA N-glycosylase activity and uracil DNA N-glycosylase activity; predicted to be involved in base-excision repair, AP site formation;  ...
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:110622]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Targeting reagents:
DISEASE ASSOCIATED WITH tdg.1 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH tdg.1 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process DNA repair (more)
Cellular Component nucleus (more)
Molecular Function DNA N-glycosylase activity (more)
GO Terms (all 6)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR005122 (1)
  • InterPro:IPR015637 (1)
  • InterPro:IPR036895 (1)
  • Pfam:PF03167 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA tdg.1-201 (1) 2884
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM tdg.1 No data available
    MARKER RELATIONSHIPS
    tdg.1Contained in: [BAC] CH211-68A17 (1) (order this), DKEY-218L23 (1) (order this)
    tdg.1Encodes: [EST] fb44b11
    [cDNA] MGC:110622 (1) (order this), MGC:192973 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001020751 (1) 2732bp
    Genomic GenBank:BX897714 (1) 184435bp
    Select Tool
    Polypeptide UniProtKB:Q503G3 (1) 441aa
    Sequence Clusters UniGene:108067 (1)
    Sequence Information (all 18)
    ORTHOLOGY for tdg.1 (Chr: 25)
    CITATIONS (22)