ZFIN ID: ZDB-GENE-050522-424
Gene Name: ganglioside induced differentiation associated protein 1
Gene Symbol: gdap1
Sequence Ontology ID : SO:0000704

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Previous Names: si:rp71-1m12.2, zgc:112286

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(Including Attributions)
Location: Chr: 24 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to be involved in mitochondrial fission, mitochondrial fusion, and protein targeting to mitochondrion; predicted to localize to the integral component of mitochondrial outer membrane;  ...
GENE EXPRESSION
Directly Submitted Expression Data: 6 figures (7 images) from Thisse et al., 2004 [MGC:112286]
Wild-type Stages, Structures: Segmentation:20-25 somites (19.0h-22.0h) to Hatching:Long-pec (48.0h-60.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa24464 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa24465 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa44107 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: Fig. 5 from Gonzaga-Jauregui et al., 2015
    Observed in:
    DISEASE ASSOCIATED WITH gdap1 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Charcot-Marie-Tooth disease axonal type 2K Charcot-Marie-Tooth disease, axonal, type 2K 607831
    Charcot-Marie-Tooth disease recessive intermediate A Charcot-Marie-Tooth disease, recessive intermediate, A 608340
    Charcot-Marie-Tooth disease type 4A Charcot-Marie-Tooth disease, type 4A 214400
    Charcot-Marie-Tooth disease, axonal, with vocal cord paresis 607706
    DISEASE ASSOCIATED WITH gdap1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process glutathione metabolic process (more)
    Cellular Component integral component of membrane (more)
    Molecular Function glutathione transferase activity (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR004045 (1)
  • InterPro:IPR010987 (1)
  • InterPro:IPR034336 (1)
  • InterPro:IPR036249 (1)
  • InterPro:IPR036282 (1)
  • InterPro:IPR040079 (1)
  • PROSITE:PS50404 (1)
  • PROSITE:PS50405 (1)
  • Pfam:PF13417 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA gdap1-201 (1) 1493
     Withdrawn Transcriptsextinct
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM gdap1 No data available
    MARKER RELATIONSHIPS
    gdap1Contained in: [BAC] RP71-1M12 (order this)
    gdap1Encodes: [cDNA] MGC:112286 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001020675 (1) 1511bp
    Genomic GenBank:AL627168 (1) 180922bp
    Select Tool
    Polypeptide UniProtKB:F1R9R0 (1) 372aa
    Sequence Clusters UniGene:85024 (1)
    Sequence Information (all 14)
    OTHER gdap1 GENE PAGES
  • Alliance (1)
  • Gene:553702 (1)
  • VEGA:OTTDARG00000002069 (1)
  • Ensembl(GRCz11):ENSDARG00000058601 (2)
  • ORTHOLOGY for gdap1 (Chr: 24)
    CITATIONS (19)