Gene

lypd6b

ID

ZDB-GENE-050522-38

Name

LY6/PLAUR domain containing 6B

Symbol

lypd6b Nomenclature History

Previous Names

CHCHD4 (1)
zgc:113301

Type

protein_coding_gene

Location

Chr: 9 Mapping Details/Browsers

Description

Predicted to have acetylcholine receptor regulator activity. Orthologous to human LYPD6B (LY6/PLAUR domain containing 6B).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

MGC:113301 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: 1 Figure from Pickart et al., 2006
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With lypd6b Human Ortholog

No data available

Associated With lypd6b Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Family	IPR039457	Ly6/PLAUR domain-containing protein 6-like
Homologous_superfamily	IPR045860	Snake toxin-like superfamily

Domain Details Per Protein

Protein	Length	Ly6/PLAUR domain-containing protein 6-like	Snake toxin-like superfamily
UniProtKB:A0A2R8PW90 InterPro	165
UniProtKB:B0S8J0 InterPro	190

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	lypd6b-202 (1) Ensembl	Havana	1709 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	lypd6b-002 (1) Ensembl	Havana	621 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations