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ZIRC
ZFIN ID: ZDB-GENE-050522-359
Gene Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
Gene Symbol: ddx47
Sequence Ontology ID : SO:0000704

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Previous Names: si:ch1073-304j18.2, zgc:112350 (1)

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(Including Attributions)
Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have RNA binding activity and RNA helicase activity. Predicted to be involved in rRNA processing. Predicted to localize to the nucleus. Orthologous to human DDX47 (DEAD-box helicase 47).
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:112350]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa7543 Point Mutation Unknown Missense ENU
PHENOTYPE No data available
DISEASE ASSOCIATED WITH ddx47 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH ddx47 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process rRNA processing (more)
Cellular Component nucleus (more)
Molecular Function ATP binding (more)
GO Terms (all 8)
TRANSCRIPTS
Type Name Length (bp) Analysis
mRNA ddx47-201 (1) 906
ddx47-202 (1) 477
 Withdrawn Transcriptsextinct
GENE PRODUCT DESCRIPTION
INTERACTIONS AND PATHWAYS
ANTIBODIESNo data available
PLASMIDSNo data available
CONSTRUCTS WITH SEQUENCES FROM ddx47 No data available
MARKER RELATIONSHIPS
ddx47Contained in: [Fosmid] CH1073-304J18 (1) (order this)
ddx47Encodes: [cDNA] MGC:112350 (1) (order this)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_001020686 (1) 1659bp
Genomic GenBank:FP102414 (1) 36335bp
Select Tool
Polypeptide UniProtKB:Q502B4 (1) 512aa
Sequence Clusters UniGene:84733 (1)
Sequence Information (all 12)
ORTHOLOGY for ddx47 (Chr: 3)
CITATIONS (14)