ZFIN ID: ZDB-GENE-050522-358
Gene Name: beta-1,3-N-acetylgalactosaminyltransferase 2
Gene Symbol: b3galnt2
Sequence Ontology ID : SO:0000704

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Name: zgc:112351

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 13 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have acetylgalactosaminyltransferase activity and acetylglucosaminyltransferase activity; involved in muscle fiber development and protein glycosylation; predicted to localize to the  ...
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:112351]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa35598 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: Fig. 5 from Stevens et al., 2013
    Observed in:
    DISEASE ASSOCIATED WITH b3galnt2 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    muscular dystrophy-dystroglycanopathy Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies, type A, 11 615181
    DISEASE ASSOCIATED WITH b3galnt2 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process muscle fiber development (more)
    Cellular Component endoplasmic reticulum (more)
    Molecular Function acetylgalactosaminyltransferase activity (more)
    GO Terms (all 13)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR002659 (1)
  • Pfam:PF01762 (1)
  • EC:2.4.1.- (1)
  • EC:2.4.1.313 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA b3galnt2-001 (1) 1408
    ncRNA b3galnt2-002 (1) 772
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM b3galnt2 No data available
    MARKER RELATIONSHIPS
    b3galnt2Contained in: [Fosmid] CH1073-414N5 (1) (order this), ZFOS-1365F10 (1)
    b3galnt2Encodes: [cDNA] MGC:112351 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001020687 (1) 1869bp
    Genomic GenBank:CU694250 (1) 40510bp
    Select Tool
    Polypeptide UniProtKB:F1RB65 (1) 491aa
    Sequence Clusters UniGene:88062 (1)
    Sequence Information (all 15)
    OTHER b3galnt2 GENE PAGES
  • Alliance (1)
  • Gene:553716 (1)
  • VEGA:OTTDARG00000035482 (1)
  • Ensembl(GRCz11):ENSDARG00000046133 (2)
  • ORTHOLOGY for b3galnt2 (Chr: 13)
    CITATIONS (21)