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ZIRC
ZFIN ID: ZDB-GENE-050522-355
Gene Name: Ras-related GTP binding Ca
Gene Symbol: rragca
Sequence Ontology ID : SO:0000704

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Attributions

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Previous Names: rragc, zgc:111971 (1)

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(Including Attributions)
Location: Chr: 16 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have GTPase activity. Predicted to be involved in several processes, including cellular response to amino acid stimulus; cellular response to starvation; and positive regulation of TOR  ...
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:111971]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Targeting reagents:
PHENOTYPE No data available
DISEASE ASSOCIATED WITH rragca HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH rragca VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process cellular response to amino acid stimulus (more)
Cellular Component EGO complex (more)
Molecular Function GTP binding (more)
GO Terms (all 10)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR006762 (1)
  • InterPro:IPR027417 (1)
  • InterPro:IPR039400 (1)
  • Pfam:PF04670 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA rragca-201 (1) 2324
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM rragca No data available
    MARKER RELATIONSHIPS
    rragcaContained in: [BAC] DKEY-15O4 (1) (order this), DKEY-66C10 (1) (order this)
    rragcaEncodes: [cDNA] MGC:111971 (1) (order this), MGC:173628 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001020635 (1) 1346bp
    Genomic GenBank:AL954832 (1) 256126bp Blast at MegaBLAST
    Polypeptide UniProtKB:A8KBK8 (1) 380aa
    Sequence Clusters UniGene:76118 (1)
    Sequence Information (all 17)
    ORTHOLOGY for rragca (Chr: 16)
    CITATIONS (19)