ZFIN ID: ZDB-GENE-050522-256
Gene Name: NIP7 nucleolar pre-rRNA processing protein
Gene Symbol: nip7
Sequence Ontology ID : SO:0000704

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Previous Name: zgc:110384 (1)

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(Including Attributions)
Location: Chr: 18 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
Directly Submitted Expression Data: 6 figures (12 images) from Thisse et al., 2004 [IMAGE:7158017]
Wild-type Stages, Structures: Gastrula:50%-epiboly (5.25h-5.66h) to Hatching:Long-pec (48.0h-60.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa32182 Point Mutation Unknown Missense ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH nip7 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH nip7 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process ribosome assembly (more)
    Cellular Component nucleus (more)
    Molecular Function RNA binding (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR002478 (1)
  • InterPro:IPR005155 (1)
  • InterPro:IPR015947 (1)
  • InterPro:IPR016686 (1)
  • InterPro:IPR036974 (1)
  • PROSITE:PS50890 (1)
  • Pfam:PF03657 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA nip7-001 (1) 849
    nip7-002 (1) 614
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM nip7 No data available
    MARKER RELATIONSHIPS
    nip7Contained in: [BAC] CH73-167I17 (1) (order this)
    nip7Encodes: [EST] IMAGE:7158017 (1) (order this)
    [cDNA] MGC:110384 (1) (order this), MGC:192133 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001020590 (1) 944bp
    Genomic GenBank:CU927919 (1) 128751bp
    Select Tool
    Polypeptide UniProtKB:B2GR20 (1) 180aa
    Sequence Clusters UniGene:16108 (1)
    Sequence Information (all 19)
    OTHER nip7 GENE PAGES
  • Alliance (1)
  • Gene:553616 (1)
  • VEGA:OTTDARG00000037211 (1)
  • Ensembl(GRCz11):ENSDARG00000059075 (2)
  • ORTHOLOGY for nip7 (Chr: 18)
    CITATIONS (20)