ZFIN ID: ZDB-GENE-050522-251
Gene Name: RNA polymerase I subunit E
Gene Symbol: polr1e
Sequence Ontology ID : SO:0000704

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Previous Name: zgc:112501

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(Including Attributions)
Location: Chr: 1 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to contribute to RNA polymerase I activity; predicted to be involved in transcription, DNA-templated; predicted to localize to the RNA polymerase I complex; orthologous to human POLR1E (RNA  ...
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:112501]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
zko376a Small Deletion Unknown Unknown CRISPR
  • China Zebrafish Resource Center (CZRC, ZKO consortium) (order this)
  • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH polr1e HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH polr1e VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process transcription, DNA-templated (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 6)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR009668 (1)
  • Pfam:PF06870 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA polr1e-002 (1) 918
    polr1e-003 (1) 936
    polr1e-004 (1) 726
    mRNA polr1e-201 (1) 1399
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM polr1e No data available
    MARKER RELATIONSHIPS
    polr1eContained in: [BAC] DKEY-245P14 (1) (order this)
    polr1eEncodes: [cDNA] MGC:112501 (1) (order this), MGC:174281 (1) (order this), MGC:191896 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001020704 (1) 1413bp
    Genomic GenBank:BX548248 (1) 195620bp
    Select Tool
    Polypeptide UniProtKB:Q501W9 (1) 413aa
    Sequence Clusters UniGene:84160 (1)
    Sequence Information (all 15)
    OTHER polr1e GENE PAGES
  • Alliance (1)
  • Gene:553733 (1)
  • VEGA:OTTDARG00000030178 (1)
  • ORTHOLOGY for polr1e (Chr: 1)
    CITATIONS (14)