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ZIRC
ZFIN ID: ZDB-GENE-050522-224
Gene Name: TEF transcription factor, PAR bZIP family member b
Gene Symbol: tefb
Sequence Ontology ID : SO:0000704

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Previous Names: tef2 (1), zgc:112180, ztef2 (1)

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(Including Attributions)
Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have RNA polymerase II regulatory region sequence-specific DNA binding activity. Involved in cellular response to light stimulus. Predicted to localize to the nucleus. Orthologous to  ...
GENE EXPRESSION
All Expression Data: 3 figures from Ben-Moshe et al., 2010
Wild-type Stages, Structures: Hatching:Pec-fin (60.0h-72.0h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa39977 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH tefb HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH tefb VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cellular response to light stimulus (more)
    Cellular Component nucleus (more)
    Molecular Function DNA-binding transcription factor activity (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR004827 (1)
  • InterPro:IPR040223 (1)
  • PROSITE:PS50217 (1)
  • Pfam:PF07716 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA tefb-201 (1) 2014
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM tefb No data available
    MARKER RELATIONSHIPS
    tefbContained in: [BAC] CH73-338O16 (1) (order this)
    tefbEncodes: [cDNA] MGC:112180 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001020661 (1) 2080bp
    Genomic GenBank:CU681842 (1) 109310bp
    Select Tool
    Polypeptide UniProtKB:F1QEE6 (1) 309aa
    Sequence Clusters UniGene:137746 (1)
    Sequence Information (all 13)
    ORTHOLOGY for tefb (Chr: 3)
    CITATIONS (19)