ZFIN ID: ZDB-GENE-050522-224
Gene Name: TEF transcription factor, PAR bZIP family member b
Gene Symbol: tefb    Nomenclature History

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Previous Names: tef2 (1), zgc:112180, ztef2 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 3 Mapping Details/Browsers
Description: Predicted to have RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Involved in cellular response to light stimulus. Predicted to localize to nucleus. Is expressed in epiphysis. Orthologous to human TEF (TEF transcription factor, PAR bZIP family member).
Genome Resources: Alliance (1),  Gene:553686 (1),  Ensembl(GRCz11):ENSDARG00000098103 (1)
GENE EXPRESSION
All Expression Data: 3 figures from Ben-Moshe et al., 2010
Wild-type Stages, Structures: Hatching:Pec-fin (60.0h-72.0h) to Hatching:Pec-fin (60.0h-72.0h)
 
High Throughput Expression: GEO (1) Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa39977 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-tefb N/A 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH tefb HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH tefb VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cellular response to light stimulus (more)
    Cellular Component nucleus (more)
    Molecular Function DNA-binding transcription factor activity (more)
    GO Terms (all 6)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA tefb-201 (1)    Ensembl 2014
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM tefb No data available
    MARKER RELATIONSHIPS
    tefb Contained in: [BAC] CH73-338O16 (1)
    tefb Encodes: [cDNA] MGC:112180 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001020661 (1) 2080 nt
    Genomic GenBank:CU681842 (1) 109310 nt
    Select Tool
    Polypeptide UniProtKB:F1QEE6 (1) 309 aa
    Sequence Information (all 12)
    ORTHOLOGY for tefb ( Chr: 3 )
    CITATIONS (20)