Gene

alkbh1

ID
ZDB-GENE-050522-196
Name
alkB homolog 1, histone H2A dioxygenase
Symbol
alkbh1 Nomenclature History
Previous Names
  • si:ch211-133l14.1
  • zgc:112365
Type
protein_coding_gene
Location
Chr: 17 Mapping Details/Browsers
Description
Predicted to have oxidoreductase activity. Predicted to be involved in oxidation-reduction process. Predicted to localize to mitochondrion and nuclear euchromatin. Orthologous to human ALKBH1 (alkB homolog 1, histone H2A dioxygenase).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
2 figures from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With alkbh1 Human Ortholog
No data available
Associated With alkbh1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR005123 Oxoglutarate/iron-dependent dioxygenase
Domain IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like
Family IPR004574 Alkylated DNA repair protein AlkB
Homologous_superfamily IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily
Domain Details Per Protein
Protein Length Alkylated DNA repair protein AlkB Alpha-ketoglutarate-dependent dioxygenase AlkB-like Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily Oxoglutarate/iron-dependent dioxygenase
UniProtKB:A0A8M2B5M4 329
UniProtKB:Q502A8 363
Transcripts
Genome Browsers
Type Name Annotation Method Length (nt) Analysis
aberrant processed transcript alkbh1-202 (1) Havana 1032 nt
mRNA alkbh1-201 (1) Havana 1214 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations