ZFIN ID: ZDB-GENE-050522-158
Gene Name: ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)
Gene Symbol: uchl3
Sequence Ontology ID : SO:0000704

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Previous Names: im:6908825, zgc:109963 (1)

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(Including Attributions)
Location: Chr: 9 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have thiol-dependent ubiquitin-specific protease activity; involved in Notch signaling pathway and cranial skeletal system development; predicted to localize to the cytoplasm;  ...
GENE EXPRESSION
Directly Submitted Expression Data: 6 figures (7 images) from Thisse et al., 2004 [IMAGE:6908825]
Wild-type Stages, Structures: Gastrula:50%-epiboly (5.25h-5.66h) to Hatching:Long-pec (48.0h-60.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa11118 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa41404 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: 4 figures from 2 publications
    Observed in:
    DISEASE ASSOCIATED WITH uchl3 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH uchl3 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cranial skeletal system development (more)
    Cellular Component cytoplasm (more)
    Molecular Function cysteine-type peptidase activity (more)
    GO Terms (all 11)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001578 (1)
  • InterPro:IPR036959 (1)
  • InterPro:IPR038765 (1)
  • PROSITE:PS00140 (1)
  • Pfam:PF01088 (1)
  • EC:3.4.19.12 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA uchl3-001 (1) 1186
    ncRNA uchl3-002 (1) 677
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM uchl3 No data available
    MARKER RELATIONSHIPS
    uchl3Contained in: [BAC] DKEY-57A22 (1) (order this)
    uchl3Encodes: [EST] IMAGE:6908825 (1) (order this)
    [cDNA] MGC:109963 (1) (order this), MGC:191500 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001024405 (1) 964bp
    Genomic GenBank:CR536604 (1) 217381bp Blast at MegaBLAST
    Polypeptide UniProtKB:Q504C0 (1) 230aa
    Sequence Clusters UniGene:47891 (1)
    Sequence Information (all 16)
    OTHER uchl3 GENE PAGES
  • Alliance (1)
  • Gene:554104 (1)
  • VEGA:OTTDARG00000021452 (1)
  • ORTHOLOGY for uchl3 (Chr: 9)
    CITATIONS (23)