ZFIN ID: ZDB-GENE-050522-155
Gene Name: protein kinase C and casein kinase substrate in neurons 1a
Gene Symbol: pacsin1a    Nomenclature History

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Previous Name: zgc:109968

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 23 Mapping Details/Browsers
Description: Predicted to have cytoskeletal protein binding activity and phospholipid binding activity. Predicted to be involved in several processes, including generation of neurons; plasma membrane tubulation; and regulation of endocytosis. Predicted to localize to cytoskeleton; endosome; and plasma membrane. Is expressed in nervous system. Orthologous to human PACSIN1 (protein kinase C and casein kinase substrate in neurons 1).
Genome Resources: Alliance (1),  Gene:553559 (1),  Ensembl(GRCz11):ENSDARG00000032865 (2)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa31081 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH pacsin1a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH pacsin1a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cytoskeleton organization (more)
    Cellular Component cytoplasm (more)
    Molecular Function cytoskeletal protein binding (more)
    GO Terms (all 11)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA pacsin1a-201 (1)    Ensembl 1053
    pacsin1a-204 (1)    Ensembl 1415
    pacsin1a-205 (1)    Ensembl 650
    ncRNA pacsin1a-002 (1)    Ensembl 882
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM pacsin1a No data available
    MARKER RELATIONSHIPS
    pacsin1a Contained in: [BAC] DKEY-226K3 (1) (order this)
    pacsin1a Encodes: [cDNA] MGC:109968 (1), MGC:191767 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001020538 (1) 1065 nt
    Genomic GenBank:CR847526 (1) 152665 nt
    Select Tool
    Polypeptide UniProtKB:A0A2R9YJM4 (1) 438 aa
    Sequence Information (all 20)
    ORTHOLOGY for pacsin1a ( Chr: 23 )
    CITATIONS (17)