header logo image header logo text
Downloads Login
Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-050522-154
Gene Name: leucine zipper-EF-hand containing transmembrane protein 1
Gene Symbol: letm1
Sequence Ontology ID : SO:0000704

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: fc31h08, fc58h01, wu:fc31h08 (1), wu:fc58h01 (1), zgc:109969 (1)

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 13 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have calcium:proton antiporter activity; predicted to be involved in calcium export from the mitochondrion, cellular calcium ion homeostasis, and protein complex oligomerization;  ...
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:109969]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la018390Tg Transgenic Insertion Unknown Unknown DNA
sa18160 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH letm1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH letm1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process calcium export from the mitochondrion (more)
    Cellular Component mitochondrial inner membrane (more)
    Molecular Function calcium:proton antiporter activity (more)
    GO Terms (all 17)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA letm1-002 (1) 1055
    mRNA letm1-201 (1) 2738
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM letm1 No data available
    MARKER RELATIONSHIPS
    letm1Contained in: [BAC] CH211-195N12 (1) (order this)
    letm1Encodes: [EST] fc31h08, fc58h01
    [cDNA] MGC:109969 (1) (order this), MGC:191626 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001045208 (1)
    Genomic GenBank:CR556722 (1) 205873bp Blast at MegaBLAST
    Polypeptide UniProtKB:A0A0R4IDC7 (1) 768aa
    Sequence Clusters UniGene:78796 (1)
    Sequence Information (all 30)
    ORTHOLOGY for letm1 (Chr: 13)
    CITATIONS (26)