ZFIN ID: ZDB-GENE-050522-127
Gene Name: activator of basal transcription 1
Gene Symbol: abt1
Sequence Ontology ID : SO:0000704

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Attributions

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Previous Names: im:7139827, zgc:109995

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(Including Attributions)
Location: Chr: 8 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have RNA binding activity; predicted to be involved in nucleic acid metabolic process, ribosomal small subunit biogenesis, and small-subunit processome assembly; predicted to localize to  ...
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7139827]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa34300 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH abt1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH abt1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (more)
    Cellular Component nucleolus (more)
    Molecular Function nucleic acid binding (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR012677 (1)
  • InterPro:IPR034353 (1)
  • InterPro:IPR035979 (1)
  • InterPro:IPR039119 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA abt1-001 (1) 1415
    abt1-002 (1) 771
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM abt1 No data available
    MARKER RELATIONSHIPS
    abt1Contained in: [BAC] DKEY-52H10 (1) (order this)
    abt1Encodes: [EST] IMAGE:7139827 (1) (order this)
    [cDNA] MGC:109995 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001020547 (1) 1423bp
    Genomic GenBank:CR457452 (1) 232104bp Blast at MegaBLAST
    Polypeptide UniProtKB:Q503Z6 (1) 305aa
    Sequence Clusters UniGene:84063 (1)
    Sequence Information (all 11)
    OTHER abt1 GENE PAGES
  • Alliance (1)
  • Gene:553568 (1)
  • VEGA:OTTDARG00000022070 (1)
  • Ensembl(GRCz11):ENSDARG00000043666 (2)
  • ORTHOLOGY for abt1 (Chr: 8)
    CITATIONS (14)