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ZIRC
ZFIN ID: ZDB-GENE-050522-127
Gene Name: activator of basal transcription 1
Gene Symbol: abt1    Nomenclature History

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Previous Names: im:7139827, zgc:109995

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 8 Mapping Details/Browsers
Description: Predicted to have RNA binding activity. Predicted to be involved in ribosomal small subunit biogenesis. Predicted to localize to the nucleolus. Orthologous to human ABT1 (activator of basal transcription 1).
Genome Resources: Alliance (1),  Gene:553568 (1),  Ensembl(GRCz11):ENSDARG00000043666 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7139827]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa34300 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH abt1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH abt1 VIA EXPERIMENTAL MODELS No data available
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR012677 (1)
  • InterPro:IPR034353 (1)
  • InterPro:IPR035979 (1)
  • InterPro:IPR039119 (1)
  • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA abt1-201 (1)    Ensembl 1415
    abt1-202 (1)    Ensembl 771
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM abt1 No data available
    MARKER RELATIONSHIPS
    abt1 Contained in: [BAC] DKEY-52H10 (1) (order this)
    abt1 Encodes: [EST] IMAGE:7139827 (1) (order this)
    [cDNA] MGC:109995 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001020547 (1) 1423 bp
    Genomic GenBank:CR457452 (1) 232104 bp Blast at MegaBLAST
    Polypeptide UniProtKB:Q503Z6 (1) 305 aa
    Sequence Clusters UniGene:84063 (1)
    Sequence Information (all 11)
    ORTHOLOGY for abt1 ( Chr: 8 )
    CITATIONS (15)