| ZFIN ID: ZDB-GENE-050522-120 |
| Gene Name: | RNA polymerase II subunit J | |||||||||||||
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| Gene Symbol: | polr2j Nomenclature History |
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Attributions
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| Previous Names: | rpb11 (1), zgc:110005 | |||||||||||||
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| Gene Type: | protein_coding_gene | |||||||||||||
| Location: | Chr: 5 Mapping Details/Browsers | |||||||||||||
| Description: | Predicted to contribute to DNA-directed 5'-3' RNA polymerase activity. Predicted to be involved in transcription by RNA polymerase II. Predicted to localize to RNA polymerase II, core complex. Orthologous to several human genes including POLR2J (RNA polymerase II subunit J). | |||||||||||||
| Genome Resources: | Alliance (1), Gene:554099 (1), Ensembl(GRCz11):ENSDARG00000035146 (2) | |||||||||||||
| All Expression Data: | Fig. 2 from Levraud et al., 2007 |
| High Throughput Expression: | GEO (1) , Expression Atlas (1) |
MUTATIONS AND SEQUENCE TARGETING REAGENTS
No data available
GENE ONTOLOGY
| Ontology | GO Term |
|---|---|
| Biological Process | transcription by RNA polymerase II (more) |
| Cellular Component | RNA polymerase II, core complex (more) |
| Molecular Function | DNA binding (more) |
| Type | Name | Length (nt) | Analysis | |
|---|---|---|---|---|
| mRNA |
polr2j-201
(1)
|
631 |
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| Browsers: UCSC, NCBI, Ensembl, ZFIN |
INTERACTIONS AND PATHWAYS
ANTIBODIES
No data available
PLASMIDS
No data available
CONSTRUCTS WITH SEQUENCES FROM polr2j
No data available
MARKER RELATIONSHIPS
| polr2j Contained in: | [BAC] DKEY-261J4 (1) (order this), DKEYP-36F5 (1) |
| polr2j Encodes: | [cDNA] MGC:110005 (1), MGC:192576 (1) |
SEQUENCE INFORMATION
| Type | Accession # | Length (nt/aa) | Analysis |
|---|---|---|---|
| RNA | RefSeq:NM_001024400 (1) | 630 nt |
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| Genomic | GenBank:AL935280 (1) | 221563 nt | Blast at MegaBLAST |
| Polypeptide | UniProtKB:Q4VBU5 (1) | 117 aa |
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ORTHOLOGY for polr2j (
Chr:
5
)
CITATIONS (18)