ZFIN ID: ZDB-GENE-050517-31
Gene Name: ATP-binding cassette, sub-family F (GCN20), member 1
Gene Symbol: abcf1    Nomenclature History

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Previous Names: wu:fb79c06 (1), wu:fc39a05 (1), wu:fj94a08 (1), zgc:85667

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 19 Mapping Details/Browsers
Description: Predicted to have ATP binding activity. Orthologous to human ABCF1 (ATP binding cassette subfamily F member 1).
Genome Resources: Alliance (1),  Gene:406467 (1),  Ensembl(GRCz11):ENSDARG00000031795 (2)
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:85667]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
bw500 Insertion Unknown Frameshift CRISPR
bw501 Small Deletion Unknown Unknown
bw502 Small Deletion Unknown Frameshift CRISPR
la028034Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa23549 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa23550 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH abcf1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH abcf1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Molecular Function ATPase activity (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA abcf1-201 (1)    Ensembl 3347
    abcf1-202 (1)    Ensembl 821
    ncRNA abcf1-003 (1)    Ensembl 663
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM abcf1 No data available
    MARKER RELATIONSHIPS
    abcf1 Contained in: [BAC] CH211-215A10 (1)
    abcf1 Encodes: [EST] fb79c06, fc39a05, fj94a08
    [cDNA] MGC:85667 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_213186 (1) 3465 nt
    Genomic GenBank:BX510301 (1) 209585 nt Blast at MegaBLAST
    Polypeptide UniProtKB:A3KPX2 (1) 877 aa
    Sequence Information (all 24)
    ORTHOLOGY for abcf1 ( Chr: 19 )
    CITATIONS (36)