ZFIN ID: ZDB-GENE-050517-2
Gene Name: ATP-binding cassette, sub-family A (ABC1), member 3b
Gene Symbol: abca3b
Sequence Ontology ID : SO:0000704

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Previous Names: abca3, si:ch211-155i15.6

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(Including Attributions)
Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
GENE EXPRESSION
All Expression Data: Fig. 8 from Chen et al., 2018
Wild-type Stages, Structures: Larval:Day 4 (96.0h-120.0h) to Larval:Day 4 (96.0h-120.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa33105 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa40008 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH abca3b HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    pulmonary alveolar proteinosis Surfactant metabolism dysfunction, pulmonary, 3 610921
    DISEASE ASSOCIATED WITH abca3b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process transmembrane transport (more)
    Cellular Component integral component of membrane (more)
    Molecular Function ATPase activity (more)
    GO Terms (all 9)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR003439 (1)
  • InterPro:IPR003593 (1)
  • InterPro:IPR017871 (1)
  • InterPro:IPR026082 (1)
  • InterPro:IPR026969 (1)
  • InterPro:IPR027417 (1)
  • PROSITE:PS00211 (1)
  • PROSITE:PS50893 (1)
  • Pfam:PF00005 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA abca3b-001 (1) 4994
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM abca3b No data available
    MARKER RELATIONSHIPS
    abca3bContained in: [BAC] CH211-155I15 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    Genomic GenBank:AL929078 (1) 171571bp
    Select Tool
    Polypeptide UniProtKB:A0A2R8Q955 (1) 1754aa
    Sequence Information (all 4)
    OTHER abca3b GENE PAGES
  • Alliance (1)
  • VEGA:OTTDARG00000032273 (1)
  • Ensembl(GRCz11):ENSDARG00000100524 (1)
  • ORTHOLOGY for abca3b (Chr: 3)
    CITATIONS (18)