ZFIN ID: ZDB-GENE-050517-18
Gene Name: ATP-binding cassette, sub-family C (CFTR/MRP), member 6a
Gene Symbol: abcc6a
Sequence Ontology ID : SO:0000704

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(Including Attributions)
Location: Chr: 6 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Larval:Days 7-13 (168.0h-14d, 4.5mm, 8 teeth)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hu4958 Point Mutation Unknown Unknown
sa963 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa2285 Point Mutation Unknown Premature Stop ENU
    sa31502 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa33821 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa40643 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: 7 figures from 5 publications
    Observed in:
    DISEASE ASSOCIATED WITH abcc6a HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    arterial calcification of infancy Arterial calcification, generalized, of infancy, 2 614473
    oculocutaneous albinism Arterial calcification, generalized, of infancy, 2 614473
    pseudoxanthoma elasticum Pseudoxanthoma elasticum 264800
    Pseudoxanthoma elasticum, forme fruste 177850
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process chordate embryonic development (more)
    Cellular Component integral component of membrane (more)
    Molecular Function ATPase activity (more)
    GO Terms (all 11)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR003439 (1)
  • InterPro:IPR003593 (1)
  • InterPro:IPR005292 (1)
  • InterPro:IPR011527 (1)
  • InterPro:IPR017871 (1)
  • InterPro:IPR027417 (1)
  • InterPro:IPR036640 (1)
  • PROSITE:PS00211 (1)
  • PROSITE:PS50893 (1)
  • PROSITE:PS50929 (1)
  • Pfam:PF00005 (1)
  • Pfam:PF00664 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA abcc6a-001 (1) 6409
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM abcc6a
    MARKER RELATIONSHIPS
    abcc6aContained in: [BAC] DKEY-176G1 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_009302206 (1)
    Genomic GenBank:BX548046 (1) 168695bp
    Select Tool
    Polypeptide UniProtKB:E7F118 (1) 1507aa
    Sequence Information (all 7)
    OTHER abcc6a GENE PAGES
  • Alliance (1)
  • Gene:566555 (1)
  • VEGA:OTTDARG00000034473 (1)
  • Ensembl(GRCz10):ENSDARG00000016750 (1)
  • ORTHOLOGY for abcc6a (Chr: 6)
    CITATIONS (25)