Gene

sema3fa

ID
ZDB-GENE-050513-1
Name
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa
Symbol
sema3fa Nomenclature History
Previous Names
  • sema3f1 (1)
  • wu:fb92d12
Type
protein_coding_gene
Location
Chr: 6 Mapping Details/Browsers
Description
Exhibits neuropilin binding activity. Involved in neural crest cell migration. Predicted to localize to extracellular space and integral component of plasma membrane. Is expressed in brain; head; pectoral fin; and somite. Orthologous to human SEMA3F (semaphorin 3F).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
6 figures from 6 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
1 Figure from van der Klaauw et al., 2019
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With sema3fa Human Ortholog
No data available
Associated With sema3fa Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001627 Sema domain
Domain IPR003598 Immunoglobulin subtype 2
Domain IPR003599 Immunoglobulin subtype
Domain IPR007110 Immunoglobulin-like domain
Domain IPR013151 Immunoglobulin
Domain IPR016201 PSI domain
Family IPR027231 Semaphorin
Homologous_superfamily IPR013783 Immunoglobulin-like fold
Homologous_superfamily IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Homologous_superfamily IPR036179 Immunoglobulin-like domain superfamily
Homologous_superfamily IPR036352 Sema domain superfamily
Domain Details Per Protein
Protein Length Immunoglobulin Immunoglobulin-like domain Immunoglobulin-like domain superfamily Immunoglobulin-like fold Immunoglobulin subtype Immunoglobulin subtype 2 PSI domain Sema domain Sema domain superfamily Semaphorin WD40/YVTN repeat-like-containing domain superfamily
UniProtKB:A0A2R8QJ63 771
UniProtKB:A4JYE5 796
UniProtKB:B3DK91 796
UniProtKB:F1QPG9 801
UniProtKB:Q5ID24 796
Transcripts
Genome Browsers
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations