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General Information
ZIRC
ZFIN ID: ZDB-GENE-050506-90
Gene Name: ubiquitin family domain containing 1
Gene Symbol: ubfd1
Sequence Ontology ID : SO:0001217

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Attributions

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Previous Names: im:6905175, zgc:162578 (1)

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(Including Attributions)
Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Orthologous to human UBFD1 (ubiquitin family domain containing 1).
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:6905175]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la024229Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa33285 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa40141 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH ubfd1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH ubfd1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component cellular_component (more)
    Molecular Function molecular_function (more)
    GO Terms (all 2)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA ubfd1-201 (1) 673
    ubfd1-203 (1) 1237
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM ubfd1 No data available
    MARKER RELATIONSHIPS
    ubfd1 Contained in: [BAC] DKEY-6E3 (1) (order this), DKEY-288D17 (1) (order this)
    ubfd1 Encodes: [EST] IMAGE:6905175 (1) (order this)
    [cDNA] MGC:162578 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001082830 (1) 1165 bp
    Genomic GenBank:BX571715 (1) 141705 bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4IIH0 (1) 290 aa
    Sequence Clusters UniGene:150324 (1)
    Sequence Information (all 15)
    ORTHOLOGY for ubfd1 ( Chr: 3 )
    CITATIONS (19)