Gene

npat

ID

ZDB-GENE-050506-54

Name

nuclear protein, ataxia-telangiectasia locus

Symbol

npat Nomenclature History

Previous Names

im:6901964
zmp:0000000655 (1)

Type

protein_coding_gene

Location

Chr: 15 Mapping Details/Browsers

Description

Predicted to have transcription coregulator activity. Predicted to be involved in positive regulation of transcription, DNA-templated and regulation of transcription involved in G1/S transition of mitotic cell cycle. Predicted to localize to nucleus. Orthologous to human NPAT (nuclear protein, coactivator of histone transcription).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

IMAGE:6901964 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With npat Human Ortholog

No data available

Associated With npat Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Conserved_site	IPR006594	LIS1 homology motif
Domain	IPR031442	Protein NPAT, C-terminal domain

Domain Details Per Protein

Protein	Length	LIS1 homology motif	Protein NPAT, C-terminal domain
UniProtKB:A0A0R4IH22 InterPro	1310

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	npat-201 (1) Ensembl	Havana	4347 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	npat-002 (1) Ensembl	Havana	445 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance

Citations