ZFIN ID: ZDB-GENE-050506-113
Gene Name: ATP synthase inhibitory factor subunit 1b
Gene Symbol: atp5if1b    Nomenclature History

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Previous Names: atpif1b, im:6908140 (1), si:ch211-154e15.5 (1), si:ch211-15d5.5, zgc:153321

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 17 Mapping Details/Browsers
Description: Predicted to have ATPase binding activity; ATPase inhibitor activity; and protein homodimerization activity. Involved in chordate embryonic development. Predicted to localize to mitochondrion. Is expressed in several structures, including blood; common myeloid progenitor; hatching gland; polster; and solid lens vesicle. Orthologous to human ATP5IF1 (ATP synthase inhibitory factor subunit 1).
Genome Resources: Alliance (1),  Gene:558368 (1),  Ensembl(GRCz11):ENSDARG00000044092 (1)
GENE EXPRESSION
All Expression Data: 8 figures from 2 publications
Directly Submitted Expression Data: 6 figures (7 images) from Thisse et al., 2004 [IMAGE:6908140]
Wild-type Stages, Structures: Segmentation:1-4 somites (10.33h-11.66h) to Adult (90d-730d, breeding adult)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Sequence Targeting Reagents
Targeting Reagent Created Alleles Publications
MO1-atp5if1b N/A 1
PHENOTYPE
Data: Fig. S2 from Shah et al., 2012
Observed in:
DISEASE ASSOCIATED WITH atp5if1b HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH atp5if1b VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process chordate embryonic development (more)
Cellular Component mitochondrion (more)
Molecular Function ATPase binding (more)
GO Terms (all 10)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA atp5if1b-201 (1)    Ensembl 819
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM atp5if1b No data available
MARKER RELATIONSHIPS
atp5if1b Contained in: [BAC] CH211-15D5 (1), CH211-154E15 (1), DKEY-148F10 (1) (order this)
atp5if1b Encodes: [EST] IMAGE:6908140 (1)
[cDNA] MGC:153321 (1), MGC:174226 (1), MGC:192613 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_001044859 (1) 601 nt
Genomic GenBank:CR352220 (1) 174580 nt
Select Tool
Polypeptide UniProtKB:B2GSH9 (1) 107 aa
Sequence Information (all 21)
ORTHOLOGY for atp5if1b ( Chr: 17 )
CITATIONS (21)