ZFIN ID: ZDB-GENE-050506-109
Gene Name: zgc:162634
Gene Symbol: zgc:162634
Sequence Ontology ID : SO:0000704

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Name: im:6906813

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 25 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to be involved in GPI anchor biosynthetic process; predicted to localize to the cytosol and glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex; orthologous to  ...

Nomenclature Note: This gene is characterized by full length cDNAs isolated as part of the Zebrafish Gene Collection (ZGC). When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix `zgc:' indicates that this gene is represented by cDNAs generated by the ZGC project.

GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:6906813]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa3312 Point Mutation Unknown Premature Stop ENU
PHENOTYPE No data available
DISEASE ASSOCIATED WITH zgc:162634 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH zgc:162634 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process GPI anchor biosynthetic process (more)
Cellular Component glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex (more)
Molecular Function molecular_function (more)
GO Terms (all 5)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR005651 (1)
  • InterPro:IPR029164 (1)
  • InterPro:IPR033535 (1)
  • Pfam:PF03966 (1)
  • Pfam:PF15159 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA pyurf-201 (1) 810
    pyurf-202 (1) 213
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM zgc:162634 No data available
    MARKER RELATIONSHIPS
    zgc:162634Contained in: [BAC] CH211-176L24 (1) (order this)
    zgc:162634Encodes: [EST] IMAGE:6906813 (1) (order this)
    [cDNA] MGC:162634 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001089372 (1) 805bp
    Genomic GenBank:CT033838 (1) 71968bp
    Select Tool
    Polypeptide UniProtKB:A3KNX3 (1) 110aa
    Sequence Clusters UniGene:83530 (1)
    Sequence Information (all 15)
    OTHER zgc:162634 GENE PAGES
  • Alliance (1)
  • Gene:555881 (1)
  • VEGA:OTTDARG00000028392 (1)
  • Ensembl(GRCz11):ENSDARG00000045773 (2)
  • ORTHOLOGY for zgc:162634 (Chr: 25)
    CITATIONS (15)