ZFIN ID: ZDB-GENE-050505-1
Gene Name: PDZ and LIM domain 3a
Gene Symbol: pdlim3a    Nomenclature History

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Previous Names: pdlim3, alp-like (1), zgc:110415

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 1 Mapping Details/Browsers
Description: Predicted to have actin binding activity and muscle alpha-actinin binding activity. Predicted to be involved in actin cytoskeleton organization; heart development; and muscle structure development. Predicted to localize to Z disc; actin cytoskeleton; and adherens junction. Is expressed in several structures, including brain; digestive system; head; immature eye; and otic vesicle. Orthologous to human PDLIM3 (PDZ and LIM domain 3).
Genome Resources: Alliance (1),  Gene:554148 (1),  Ensembl(GRCz11):ENSDARG00000011023 (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH pdlim3a HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH pdlim3a VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process actin cytoskeleton organization (more)
Cellular Component adherens junction (more)
Molecular Function metal ion binding (more)
GO Terms (all 10)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA pdlim3a-201 (1)    Ensembl 1504
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM pdlim3a No data available
MARKER RELATIONSHIPS
pdlim3a Contained in: [BAC] DKEY-256E7 (order this)
pdlim3a Encodes: [cDNA] MGC:110415 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_001024376 (1) 1522 nt
Genomic GenBank:CR759951 (1) 120721 nt
Select Tool
Polypeptide UniProtKB:A0A2R8QQB0 (1) 307 aa
Sequence Information (all 12)
ORTHOLOGY for pdlim3a ( Chr: 1 )
CITATIONS (18)