ZFIN ID: ZDB-GENE-050420-347
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Gene Name: FYVE, RhoGEF and PH domain containing 4a
Gene Symbol: fgd4a
Sequence Ontology ID : SO:0000704

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Previous Names: fgd4, si:ch211-194i18.1, si:dkey-57m7.1

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(Including Attributions)
Location: Chr: 18 Mapping Details/Browsers
Nomenclature History
Note: This gene has an almost identical sequence to si:dkey-57m7.1. The EST CK683166 matches both.
GENE EXPRESSION
Directly Submitted Expression Data: 4 figures (4 images) from Thisse et al., 2004 [IMAGE:7145382]
Wild-type Stages, Structures: Segmentation:20-25 somites (19.0h-22.0h) to Hatching:Long-pec (48.0h-60.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la027904Tg Transgenic Insertion Unknown Unknown DNA
sa23242 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa23243 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa36587 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa43057 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH fgd4a HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Charcot-Marie-Tooth disease type 4H Charcot-Marie-Tooth disease, type 4H 609311
    DISEASE ASSOCIATED WITH fgd4a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of Rho protein signal transduction (more)
    Molecular Function guanyl-nucleotide exchange factor activity (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000219 (1)
  • InterPro:IPR000306 (1)
  • InterPro:IPR001849 (1)
  • InterPro:IPR011993 (1)
  • InterPro:IPR013083 (1)
  • InterPro:IPR017455 (1)
  • InterPro:IPR035899 (1)
  • InterPro:IPR035941 (1)
  • InterPro:IPR037742 (1)
    		•
  • PROSITE:PS50003 (1)
  • PROSITE:PS50010 (1)
  • PROSITE:PS50178 (1)
    		•
  • Pfam:PF00169 (1)
  • Pfam:PF00621 (1)
  • Pfam:PF01363 (1)
    		•
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA fgd4a-001 (1) 479
    Select Tool
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM fgd4a No data available
    MARKER RELATIONSHIPS
    fgd4aContained in: [BAC] CH211-136I24 (1) (order this), CH211-194I18 (1) (order this)
    fgd4aEncodes: [EST] IMAGE:7145382 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001177933 (1) 3451bp
    Select Tool
    Genomic GenBank:CR293524 (1) 190196bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4ILP5 (1) 728aa
    Select Tool
    Sequence Clusters UniGene:158966 (1)
    Sequence Information (all 21)
    OTHER fgd4a GENE PAGES
  • Alliance (1)
  • Gene:556216 (1)
  • VEGA:OTTDARG00000034660 (1)
    • ORTHOLOGY for fgd4a (Chr: 18)
    CITATIONS (16)