ZFIN ID: ZDB-GENE-050420-179
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Gene Name: si:ch211-132b12.6
Gene Symbol: si:ch211-132b12.6    Nomenclature History

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Gene Type: protein_coding_gene
Location: Chr: 18 Mapping Details/Browsers
Description: Predicted to have gamma-aminobutyric acid:sodium symporter activity and neurotransmitter binding activity. Predicted to localize to the neuron projection and plasma membrane. Orthologous to human SLC6A12 (solute carrier family 6 member 12).
Genome Resources: Alliance (1),  Gene:564583 (1),  Ensembl(GRCz11):ENSDARG00000094546 (1)

Nomenclature Note: This gene is derived from the zebrafish genome sequencing and annotation project. When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix 'si:' indicates that this gene is represented by annotated genomic sequence from the Sanger Institute.

GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa32214 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH si:ch211-132b12.6 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH si:ch211-132b12.6 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component integral component of membrane (more)
    Molecular Function neurotransmitter:sodium symporter activity (more)
    GO Terms (all 8)
    PROTEIN FAMILIES, DOMAINS AND SITES
    Type InterPro ID Name
    Family IPR000175 Sodium:neurotransmitter symporter
    Homologous_superfamily IPR037272 Sodium:neurotransmitter symporter superfamily
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA si:ch211-132b12.6-201 (1)    Ensembl 1975
    Select Tool
    Browsers: UCSC,  NCBI,  Ensembl,  ZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM si:ch211-132b12.6 No data available
    MARKER RELATIONSHIPS
    si:ch211-132b12.6 Contained in: [BAC] CH211-132B12 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001045058 (1) 1975 bp
    Select Tool
    Genomic GenBank:BX664607 (1) 179328 bp
    Select Tool
    Polypeptide UniProtKB:Q1LVI6 (1) 577 aa
    Select Tool
    Sequence Information (all 6)
    ORTHOLOGY for si:ch211-132b12.6 ( Chr: 18 )
    CITATIONS (13)